STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
whiB-9Transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. (141 aa)    
Predicted Functional Partners:
ORV39864.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.797
ORV39861.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.763
ORV39862.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.763
ORV39865.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.730
ORV40079.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.725
ORV41530.1
Type VII secretion-associated serine protease mycosin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.
   
    0.720
ORV41531.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.718
ORV41617.1
Type VII secretion-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.701
ORV39859.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.694
ORV39858.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.683
Your Current Organism:
Mycobacterium conspicuum
NCBI taxonomy Id: 44010
Other names: ATCC 700090, CIP 105165, DSM 44136, JCM 14738, M. conspicuum, strain 3895/92
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.