STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORV39117.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)    
Predicted Functional Partners:
ORV39119.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.975
ORV39120.1
3-hydroxybutyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.969
ORV39121.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.968
ORV39118.1
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.902
ORV39116.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.896
ORV39115.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.787
ORV46170.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 
0.728
ORV42198.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.562
ORV39122.1
PE-PGRS family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.511
ORV45901.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.477
Your Current Organism:
Mycobacterium conspicuum
NCBI taxonomy Id: 44010
Other names: ATCC 700090, CIP 105165, DSM 44136, JCM 14738, M. conspicuum, strain 3895/92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.