STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORV38265.1Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (174 aa)    
Predicted Functional Partners:
ORV47202.1
Carbonic anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.876
ORV35301.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.817
ORV41950.1
Carbonate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.804
ORV43238.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.790
ORV38266.1
3-ketosteroid-9-alpha-hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.587
ORV38267.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.587
vapC-13
Twitching motility protein PilT; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
       0.471
ORV38264.1
Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
       0.471
ORV42609.1
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thioredoxin family.
    
   0.457
ORV41852.1
Co-chaperone YbbN; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.457
Your Current Organism:
Mycobacterium conspicuum
NCBI taxonomy Id: 44010
Other names: ATCC 700090, CIP 105165, DSM 44136, JCM 14738, M. conspicuum, strain 3895/92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.