STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ORV38270.1Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)    
Predicted Functional Partners:
ORV38269.1
Sulfotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.993
ORV38271.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.985
ORV41757.1
3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.844
ORV39998.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.836
ORV39154.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.808
ORV39155.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.808
ORV42263.1
Sulfotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.745
AWC00_11640
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.744
ORV38094.1
Sulfotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.714
ORV44835.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.677
Your Current Organism:
Mycobacterium conspicuum
NCBI taxonomy Id: 44010
Other names: ATCC 700090, CIP 105165, DSM 44136, JCM 14738, M. conspicuum, strain 3895/92
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