STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ORV38279.1DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa)    
Predicted Functional Partners:
ORV38277.1
Lipid-transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
ORV38278.1
beta-hydroxyacyl-ACP dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
ORV38280.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.997
ORV38281.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.993
ORV44205.1
Acyl dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.961
ORV41763.1
Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.951
ORV38283.1
acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.931
ORV38282.1
Steroid C27-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.
 
   
 0.906
ORV35271.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.894
ORV38260.1
Lipid-transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.890
Your Current Organism:
Mycobacterium conspicuum
NCBI taxonomy Id: 44010
Other names: ATCC 700090, CIP 105165, DSM 44136, JCM 14738, M. conspicuum, strain 3895/92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.