Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ORV37729.1Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (343 aa)    
Predicted Functional Partners:
ORV37793.1
MCE-family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.982
ORV38241.1
MCE-family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.968
AWC00_07360
Mce protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.962
ORV37731.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.957
ORV37754.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.946
ORV38243.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.945
ORV44270.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.944
ORV35170.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.929
ORV41426.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.929
ORV37756.1
MCE-family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.926
Your Current Organism:
Mycobacterium conspicuum
NCBI taxonomy Id: 44010
Other names: ATCC 700090, CIP 105165, DSM 44136, JCM 14738, M. conspicuum, strain 3895/92
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