STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG46318.1beta-N-acetylhexosaminidase. (365 aa)    
Predicted Functional Partners:
SDG61837.1
CubicO group peptidase, beta-lactamase class C family.
 
 0.861
SDG46306.1
Uncharacterized conserved protein, DUF1697 family.
       0.773
SDG52671.1
Hexosaminidase.
    
 0.762
SDG86175.1
N-acetylglucosamine kinase.
    
  0.715
SDG46340.1
Diguanylate cyclase (GGDEF) domain-containing protein.
       0.591
SDG46284.1
Threonine/homoserine/homoserine lactone efflux protein.
       0.585
SDH11143.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
  
  
0.570
SDG12193.1
Hypothetical protein.
  
  
 0.489
anmK
anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.
 
   
 0.461
SDG17401.1
Hypothetical protein.
   
 
 0.460
Your Current Organism:
Pelagibacterium luteolum
NCBI taxonomy Id: 440168
Other names: CELMS EEUT 1C1627, CGMCC 1.10267, Devosia sp. 1_C16_27, Hyphomicrobiaceae bacterium 1_C16_27, JCM 16552, P. luteolum, Pelagibacterium luteolum Xu et al. 2011, strain 1_C16_27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.