STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH11321.1Putative tricarboxylic transport membrane protein. (499 aa)    
Predicted Functional Partners:
SDH11359.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
    0.923
SDG74468.1
Putative tricarboxylic transport membrane protein.
  
    0.828
SDH18040.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
    0.828
SDH18123.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
  
    0.828
SDG15410.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
  
    0.827
SDG52915.1
Putative tricarboxylic transport membrane protein.
  
    0.827
SDH18384.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
    0.827
SDG26820.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
  
    0.825
SDG87973.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
  
    0.824
SDG83142.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
    0.823
Your Current Organism:
Pelagibacterium luteolum
NCBI taxonomy Id: 440168
Other names: CELMS EEUT 1C1627, CGMCC 1.10267, Devosia sp. 1_C16_27, Hyphomicrobiaceae bacterium 1_C16_27, JCM 16552, P. luteolum, Pelagibacterium luteolum Xu et al. 2011, strain 1_C16_27
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