STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR55158.1Cystathionine gamma-lyase. (384 aa)    
Predicted Functional Partners:
SFR82390.1
Cystathionine beta-synthase.
 
  0.979
SFR64042.1
Cystathionine beta-synthase.
 
  0.957
SFR88534.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
  
 
 0.954
SFR88413.1
Aspartate kinase.
  
 
 0.950
SFR84367.1
Cystathionine beta-lyase.
  
  
 
0.942
SFR89534.1
Aspartate aminotransferase.
   
 
  0.938
SFR92744.1
Aspartate aminotransferase.
   
 
  0.938
SFR78990.1
Aspartate kinase.
  
 
 0.936
SFR88400.1
O-acetylhomoserine sulfhydrylase.
 
 
 
0.922
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
  
  
 
0.913
Your Current Organism:
Maribacter stanieri
NCBI taxonomy Id: 440514
Other names: DSM 19891, KCTC 22023, KMM 6046, LMG 22581, LMG:22581, Maribacter sp. KMM 6025, Maribacter sp. KMM 6046, Maribacter stanieri Nedashkovskaya et al. 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.