STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR60287.1Hypothetical protein. (132 aa)    
Predicted Functional Partners:
SFR83417.1
Hypothetical protein.
  
     0.652
SFR63042.1
Outer membrane protein beta-barrel domain-containing protein.
  
     0.624
SFR56837.1
Hypothetical protein.
  
     0.613
SFR81438.1
Protein involved in gliding motility GldI.
  
     0.603
SFR63487.1
AhpC/TSA family protein.
  
     0.601
SFR91701.1
Hypothetical protein.
  
     0.548
SFR65658.1
Hypothetical protein.
  
     0.537
SFR63880.1
Hypothetical protein.
  
     0.529
SFR58774.1
Hypothetical protein.
  
     0.526
aspS
aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
       0.526
Your Current Organism:
Maribacter stanieri
NCBI taxonomy Id: 440514
Other names: DSM 19891, KCTC 22023, KMM 6046, LMG 22581, LMG:22581, Maribacter sp. KMM 6025, Maribacter sp. KMM 6046, Maribacter stanieri Nedashkovskaya et al. 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.