STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR73020.1GAF domain-containing protein. (445 aa)    
Predicted Functional Partners:
SFR59674.1
Signal transduction histidine kinase.
 
 
0.999
SFR61116.1
Signal transduction histidine kinase.
 0.999
SFR66097.1
Signal transduction histidine kinase.
 
0.999
SFR74872.1
Type IV pili methyl-accepting chemotaxis transducer N-term.
  
 0.999
SFR78881.1
Signal transduction histidine kinase.
 
 0.999
SFR82913.1
Signal transduction histidine kinase.
  
0.999
SFR85295.1
Hpt domain-containing protein.
0.999
SFR92689.1
Signal transduction histidine kinase.
0.999
SFR66363.1
PAS domain S-box-containing protein.
 
 
0.988
SFR66615.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
 0.979
Your Current Organism:
Maribacter stanieri
NCBI taxonomy Id: 440514
Other names: DSM 19891, KCTC 22023, KMM 6046, LMG 22581, LMG:22581, Maribacter sp. KMM 6025, Maribacter sp. KMM 6046, Maribacter stanieri Nedashkovskaya et al. 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.