Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR74000.1 | SFR74018.1 | SAMN04488010_2291 | SAMN04488010_2293 | Hypothetical protein. | Ribosomal large subunit pseudouridine synthase D. | 0.549 |
SFR74000.1 | SFR74028.1 | SAMN04488010_2291 | SAMN04488010_2294 | Hypothetical protein. | Protein of unknown function. | 0.436 |
SFR74000.1 | panB | SAMN04488010_2291 | SAMN04488010_2292 | Hypothetical protein. | Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family. | 0.590 |
SFR74018.1 | SFR74000.1 | SAMN04488010_2293 | SAMN04488010_2291 | Ribosomal large subunit pseudouridine synthase D. | Hypothetical protein. | 0.549 |
SFR74018.1 | SFR74028.1 | SAMN04488010_2293 | SAMN04488010_2294 | Ribosomal large subunit pseudouridine synthase D. | Protein of unknown function. | 0.687 |
SFR74018.1 | panB | SAMN04488010_2293 | SAMN04488010_2292 | Ribosomal large subunit pseudouridine synthase D. | Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family. | 0.789 |
SFR74028.1 | SFR74000.1 | SAMN04488010_2294 | SAMN04488010_2291 | Protein of unknown function. | Hypothetical protein. | 0.436 |
SFR74028.1 | SFR74018.1 | SAMN04488010_2294 | SAMN04488010_2293 | Protein of unknown function. | Ribosomal large subunit pseudouridine synthase D. | 0.687 |
SFR74028.1 | panB | SAMN04488010_2294 | SAMN04488010_2292 | Protein of unknown function. | Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family. | 0.627 |
panB | SFR74000.1 | SAMN04488010_2292 | SAMN04488010_2291 | Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family. | Hypothetical protein. | 0.590 |
panB | SFR74018.1 | SAMN04488010_2292 | SAMN04488010_2293 | Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family. | Ribosomal large subunit pseudouridine synthase D. | 0.789 |
panB | SFR74028.1 | SAMN04488010_2292 | SAMN04488010_2294 | Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family. | Protein of unknown function. | 0.627 |