STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR74524.1Helix-turn-helix domain-containing protein. (382 aa)    
Predicted Functional Partners:
SFR89764.1
Hypothetical protein.
  
     0.673
SFR78864.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.649
SFR62173.1
Polysaccharide pyruvyl transferase.
  
     0.604
SFR78871.1
Starch-binding associating with outer membrane.
  
     0.525
SFR75196.1
Hypothetical protein.
  
     0.503
SFR85468.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
  
     0.486
SFR85182.1
Signal transduction histidine kinase.
  
  
  0.455
SFR54417.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.438
SFR67668.1
Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfG subunit.
  
     0.423
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.422
Your Current Organism:
Maribacter stanieri
NCBI taxonomy Id: 440514
Other names: DSM 19891, KCTC 22023, KMM 6046, LMG 22581, LMG:22581, Maribacter sp. KMM 6025, Maribacter sp. KMM 6046, Maribacter stanieri Nedashkovskaya et al. 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.