STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR75928.1Protein of unknown function. (236 aa)    
Predicted Functional Partners:
SFR75918.1
Protein of unknown function.
 
     0.943
SFR75910.1
Tetratricopeptide repeat-containing protein.
 
    0.887
SFR75852.1
Anti-sigma-K factor rskA.
  
     0.658
SFR92435.1
Hypothetical protein; Partial gene; manually curated.
  
 
   0.543
SFR75938.1
LETM1-like protein.
       0.534
SFR50190.1
Hypothetical protein.
  
     0.512
SFR93444.1
Hypothetical protein; Partial gene; manually curated.
  
 
   0.510
SFR72272.1
Permease of the drug/metabolite transporter (DMT) superfamily.
  
     0.505
SFR72351.1
Outer membrane receptor for ferrienterochelin and colicins.
 
     0.504
SFR50103.1
Putative porin.
  
 
   0.501
Your Current Organism:
Maribacter stanieri
NCBI taxonomy Id: 440514
Other names: DSM 19891, KCTC 22023, KMM 6046, LMG 22581, LMG:22581, Maribacter sp. KMM 6025, Maribacter sp. KMM 6046, Maribacter stanieri Nedashkovskaya et al. 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.