STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR78724.1GDSL-like Lipase/Acylhydrolase. (240 aa)    
Predicted Functional Partners:
SFR78752.1
Heparinase II/III-like protein.
 
  
  0.874
SFR78732.1
FAD dependent oxidoreductase.
 
     0.815
SFR78713.1
Arylsulfatase A.
 
     0.779
SFR78702.1
Arylsulfatase A.
 
     0.771
SFR78742.1
Hypothetical protein.
       0.757
SFR90290.1
Hypothetical protein; Partial gene; manually curated.
  
  0.712
SFR78837.1
Hypothetical protein.
 
 
   0.681
SFR66061.1
Glycosyl hydrolase family 115.
  
 
   0.617
SFR78659.1
Hypothetical protein.
  
  0.609
SFR72561.1
Hypothetical protein.
  
     0.597
Your Current Organism:
Maribacter stanieri
NCBI taxonomy Id: 440514
Other names: DSM 19891, KCTC 22023, KMM 6046, LMG 22581, LMG:22581, Maribacter sp. KMM 6025, Maribacter sp. KMM 6046, Maribacter stanieri Nedashkovskaya et al. 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.