STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR81140.1GAF sensor signal transduction histidine kinase. (403 aa)    
Predicted Functional Partners:
SFR85295.1
Hpt domain-containing protein.
 
0.962
SFR53409.1
Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR.
 
 0.919
SFR92689.1
Signal transduction histidine kinase.
 
0.854
SFR66615.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
 0.851
SFR53963.1
Signal transduction histidine kinase.
 0.832
SFR61116.1
Signal transduction histidine kinase.
 0.816
SFR66363.1
PAS domain S-box-containing protein.
 0.792
SFR66097.1
Signal transduction histidine kinase.
 
 0.762
SFR76612.1
Signal transduction histidine kinase.
 
 0.741
SFR66710.1
Response regulator receiver domain-containing protein.
 
   0.733
Your Current Organism:
Maribacter stanieri
NCBI taxonomy Id: 440514
Other names: DSM 19891, KCTC 22023, KMM 6046, LMG 22581, LMG:22581, Maribacter sp. KMM 6025, Maribacter sp. KMM 6046, Maribacter stanieri Nedashkovskaya et al. 2010
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.