STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR82464.1Hypothetical protein. (404 aa)    
Predicted Functional Partners:
SFR57546.1
Subtilase family protein; Belongs to the peptidase S8 family.
   
 0.885
SFR55178.1
Protein of unknown function.
  
 
 0.859
SFR62654.1
Hypothetical protein.
  
     0.684
SFR50190.1
Hypothetical protein.
  
     0.679
SFR68134.1
Hypothetical protein.
  
     0.676
SFR79042.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
     0.662
SFR68126.1
Hypothetical protein.
  
     0.646
SFR67717.1
Hypothetical protein.
    
  0.637
SFR93149.1
Preprotein translocase subunit SecE; Belongs to the SecE/SEC61-gamma family.
  
     0.630
SFR81359.1
Adenylyltransferase and sulfurtransferase.
    
 0.619
Your Current Organism:
Maribacter stanieri
NCBI taxonomy Id: 440514
Other names: DSM 19891, KCTC 22023, KMM 6046, LMG 22581, LMG:22581, Maribacter sp. KMM 6025, Maribacter sp. KMM 6046, Maribacter stanieri Nedashkovskaya et al. 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.