STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR82573.1Glycosyltransferase involved in cell wall bisynthesis. (335 aa)    
Predicted Functional Partners:
SFR56985.1
Polysaccharide deacetylase.
  
 
 0.651
SFR62088.1
Methyltransferase domain-containing protein.
  
 
 0.581
SFR75493.1
Trehalose 6-phosphate synthase /trehalose 6-phosphatase.
  
 
 0.570
SFR64305.1
Hypothetical protein.
  
 
 0.559
SFR61200.1
Hypothetical protein.
  
     0.558
SFR58410.1
Protein involved in gliding motility SprE.
  
   0.551
SFR82567.1
N-terminal double-transmembrane domain-containing protein.
       0.541
SFR59209.1
Protein of unknown function.
  
     0.537
SFR60933.1
Transcriptional regulator, AraC family.
  
 
 0.520
SFR61849.1
Tetratricopeptide repeat-containing protein.
  
   0.504
Your Current Organism:
Maribacter stanieri
NCBI taxonomy Id: 440514
Other names: DSM 19891, KCTC 22023, KMM 6046, LMG 22581, LMG:22581, Maribacter sp. KMM 6025, Maribacter sp. KMM 6046, Maribacter stanieri Nedashkovskaya et al. 2010
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