Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR56985.1 | SFR62088.1 | SAMN04488010_0632 | SAMN04488010_1162 | Polysaccharide deacetylase. | Methyltransferase domain-containing protein. | 0.600 |
SFR56985.1 | SFR82573.1 | SAMN04488010_0632 | SAMN04488010_3054 | Polysaccharide deacetylase. | Glycosyltransferase involved in cell wall bisynthesis. | 0.651 |
SFR58410.1 | SFR61200.1 | SAMN04488010_0820 | SAMN04488010_1063 | Protein involved in gliding motility SprE. | Hypothetical protein. | 0.443 |
SFR58410.1 | SFR61849.1 | SAMN04488010_0820 | SAMN04488010_1131 | Protein involved in gliding motility SprE. | Tetratricopeptide repeat-containing protein. | 0.580 |
SFR58410.1 | SFR62088.1 | SAMN04488010_0820 | SAMN04488010_1162 | Protein involved in gliding motility SprE. | Methyltransferase domain-containing protein. | 0.493 |
SFR58410.1 | SFR82567.1 | SAMN04488010_0820 | SAMN04488010_3053 | Protein involved in gliding motility SprE. | N-terminal double-transmembrane domain-containing protein. | 0.434 |
SFR58410.1 | SFR82573.1 | SAMN04488010_0820 | SAMN04488010_3054 | Protein involved in gliding motility SprE. | Glycosyltransferase involved in cell wall bisynthesis. | 0.551 |
SFR59209.1 | SFR82573.1 | SAMN04488010_0889 | SAMN04488010_3054 | Protein of unknown function. | Glycosyltransferase involved in cell wall bisynthesis. | 0.537 |
SFR60933.1 | SFR62088.1 | SAMN04488010_1033 | SAMN04488010_1162 | Transcriptional regulator, AraC family. | Methyltransferase domain-containing protein. | 0.662 |
SFR60933.1 | SFR82573.1 | SAMN04488010_1033 | SAMN04488010_3054 | Transcriptional regulator, AraC family. | Glycosyltransferase involved in cell wall bisynthesis. | 0.520 |
SFR61200.1 | SFR58410.1 | SAMN04488010_1063 | SAMN04488010_0820 | Hypothetical protein. | Protein involved in gliding motility SprE. | 0.443 |
SFR61200.1 | SFR82573.1 | SAMN04488010_1063 | SAMN04488010_3054 | Hypothetical protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.558 |
SFR61849.1 | SFR58410.1 | SAMN04488010_1131 | SAMN04488010_0820 | Tetratricopeptide repeat-containing protein. | Protein involved in gliding motility SprE. | 0.580 |
SFR61849.1 | SFR62088.1 | SAMN04488010_1131 | SAMN04488010_1162 | Tetratricopeptide repeat-containing protein. | Methyltransferase domain-containing protein. | 0.655 |
SFR61849.1 | SFR82567.1 | SAMN04488010_1131 | SAMN04488010_3053 | Tetratricopeptide repeat-containing protein. | N-terminal double-transmembrane domain-containing protein. | 0.792 |
SFR61849.1 | SFR82573.1 | SAMN04488010_1131 | SAMN04488010_3054 | Tetratricopeptide repeat-containing protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.504 |
SFR62088.1 | SFR56985.1 | SAMN04488010_1162 | SAMN04488010_0632 | Methyltransferase domain-containing protein. | Polysaccharide deacetylase. | 0.600 |
SFR62088.1 | SFR58410.1 | SAMN04488010_1162 | SAMN04488010_0820 | Methyltransferase domain-containing protein. | Protein involved in gliding motility SprE. | 0.493 |
SFR62088.1 | SFR60933.1 | SAMN04488010_1162 | SAMN04488010_1033 | Methyltransferase domain-containing protein. | Transcriptional regulator, AraC family. | 0.662 |
SFR62088.1 | SFR61849.1 | SAMN04488010_1162 | SAMN04488010_1131 | Methyltransferase domain-containing protein. | Tetratricopeptide repeat-containing protein. | 0.655 |
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