STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000718985_00350Unannotated protein. (330 aa)    
Predicted Functional Partners:
GCA_000718985_00351
Unannotated protein.
 
 
  0.995
GCA_000718985_03226
Unannotated protein.
  
  
  0.943
GCA_000718985_01520
Unannotated protein.
 
  
 0.886
GCA_000718985_01521
Unannotated protein.
 
  
 0.878
GCA_000718985_00349
Unannotated protein.
 
    0.832
GCA_000718985_01907
Unannotated protein.
  
  
  0.825
GCA_000718985_00348
Unannotated protein.
 
    0.775
GCA_000718985_00352
Unannotated protein.
 
  
 
0.771
GCA_000718985_01523
Unannotated protein.
  
    0.770
GCA_000718985_01527
Unannotated protein.
  
  
 
0.729
Your Current Organism:
Streptomyces megasporus
NCBI taxonomy Id: 44060
Other names: ATCC 43688, Actinomyces megasporus, DSM 41476, HUT 6610, IFO 14749, INA M-22, INMI 2869, JCM 6926, NBRC 14749, NRRL B-16372, S. megasporus, Streptomyces megalosporus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.