STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000718985_00891Unannotated protein. (418 aa)    
Predicted Functional Partners:
GCA_000718985_00892
Unannotated protein.
 
 0.999
GCA_000718985_00890
Unannotated protein.
 
  
 0.989
GCA_000718985_00888
Unannotated protein.
 
 
 0.983
GCA_000718985_00887
Unannotated protein.
 
 
 0.977
GCA_000718985_00893
Unannotated protein.
 
  
 0.936
GCA_000718985_05333
Unannotated protein.
  
 
  0.903
GCA_000718985_01187
Unannotated protein.
    
 0.889
GCA_000718985_00608
Unannotated protein.
     
 0.886
GCA_000718985_01836
Unannotated protein.
   
   0.772
GCA_000718985_00560
Unannotated protein.
    
   0.770
Your Current Organism:
Streptomyces megasporus
NCBI taxonomy Id: 44060
Other names: ATCC 43688, Actinomyces megasporus, DSM 41476, HUT 6610, IFO 14749, INA M-22, INMI 2869, JCM 6926, NBRC 14749, NRRL B-16372, S. megasporus, Streptomyces megalosporus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.