STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000718985_02169Unannotated protein. (455 aa)    
Predicted Functional Partners:
GCA_000718985_02171
Unannotated protein.
 
  
  0.964
GCA_000718985_02170
Unannotated protein.
 
     0.962
GCA_000718985_00279
Unannotated protein.
    
 
 0.809
GCA_000718985_00097
Unannotated protein.
   
 0.782
GCA_000718985_02174
Unannotated protein.
 
    0.782
GCA_000718985_04716
Unannotated protein.
   
 0.775
GCA_000718985_02168
Unannotated protein.
 
     0.761
GCA_000718985_01208
Unannotated protein.
  
 0.651
GCA_000718985_00093
Unannotated protein.
  
 0.627
GCA_000718985_01083
Unannotated protein.
  
  
 0.545
Your Current Organism:
Streptomyces megasporus
NCBI taxonomy Id: 44060
Other names: ATCC 43688, Actinomyces megasporus, DSM 41476, HUT 6610, IFO 14749, INA M-22, INMI 2869, JCM 6926, NBRC 14749, NRRL B-16372, S. megasporus, Streptomyces megalosporus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.