STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000718985_03288Unannotated protein. (321 aa)    
Predicted Functional Partners:
GCA_000718985_03918
Unannotated protein.
 
  
 0.961
GCA_000718985_00818
Unannotated protein.
    
 0.898
GCA_000718985_00162
Unannotated protein.
  
 
 0.876
GCA_000718985_02723
Unannotated protein.
 
  
  0.868
GCA_000718985_02099
Unannotated protein.
 
 
 0.823
GCA_000718985_02746
Unannotated protein.
  
 
 0.791
GCA_000718985_01406
Unannotated protein.
    
   0.790
GCA_000718985_00598
Unannotated protein.
  
  
 0.789
GCA_000718985_03287
Unannotated protein.
       0.787
GCA_000718985_02756
Unannotated protein.
  
  
 0.773
Your Current Organism:
Streptomyces megasporus
NCBI taxonomy Id: 44060
Other names: ATCC 43688, Actinomyces megasporus, DSM 41476, HUT 6610, IFO 14749, INA M-22, INMI 2869, JCM 6926, NBRC 14749, NRRL B-16372, S. megasporus, Streptomyces megalosporus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.