STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000718985_05020Unannotated protein. (456 aa)    
Predicted Functional Partners:
GCA_000718985_00818
Unannotated protein.
 
 0.999
GCA_000718985_02827
Unannotated protein.
   
 0.994
GCA_000718985_04018
Unannotated protein.
  
 0.990
GCA_000718985_03370
Unannotated protein.
  
 0.966
GCA_000718985_03809
Unannotated protein.
 
0.948
GCA_000718985_04090
Unannotated protein.
   
 
 0.910
GCA_000718985_04960
Unannotated protein.
  
 
 0.901
GCA_000718985_00889
Unannotated protein.
     
 0.886
GCA_000718985_04961
Unannotated protein.
  
  
 0.883
GCA_000718985_04962
Unannotated protein.
  
  
 0.881
Your Current Organism:
Streptomyces megasporus
NCBI taxonomy Id: 44060
Other names: ATCC 43688, Actinomyces megasporus, DSM 41476, HUT 6610, IFO 14749, INA M-22, INMI 2869, JCM 6926, NBRC 14749, NRRL B-16372, S. megasporus, Streptomyces megalosporus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.