STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH75266.1Polyketide cyclase / dehydrase and lipid transport. (155 aa)    
Predicted Functional Partners:
CUH79010.1
Hypothetical protein.
  
     0.773
CUH76499.1
Hypothetical protein.
  
     0.771
CUH82498.1
Hypothetical protein.
  
     0.769
CUH79009.1
Hypothetical protein.
  
     0.764
CUH79318.1
Core-2/I-Branching enzyme.
  
     0.760
CUH79319.1
Sulfotransferase family protein.
  
     0.760
CUH78562.1
Hypothetical protein.
  
     0.754
CUH75052.1
H-type lectin domain protein.
  
     0.752
nudC
NADH pyrophosphatase.
       0.738
CUH77020.1
Hypothetical protein.
  
     0.702
Your Current Organism:
Tropicibacter naphthalenivorans
NCBI taxonomy Id: 441103
Other names: DSM 19561, JCM 14838, T. naphthalenivorans, Tropicibacter naphthalenivorans Harwati et al. 2009, alpha proteobacterium C02, strain C02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.