STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
macA_1Macrolide-specific efflux protein MacA precursor. (400 aa)    
Predicted Functional Partners:
CUH75301.1
Putative ABC transporter ATP-binding protein/MT1014.
 
 
 0.987
CUH75303.1
Lipoprotein releasing system, transmembrane protein, LolC/E family.
 
     0.949
bepC
Outer membrane efflux protein BepC precursor.
  
 0.908
cusC
Cation efflux system protein CusC precursor; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.
  
 0.899
CUH78777.1
Type I secretion outer membrane protein, TolC family.
  
 0.772
CUH81879.1
Outer membrane efflux protein.
  
 0.771
mdtC
Multidrug transporter MdtC; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.767
mexB
Multidrug-efflux transporter MexB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.726
ttgH
Toluene efflux pump membrane transporter TtgH; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.726
czcA
Cation efflux system protein CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.726
Your Current Organism:
Tropicibacter naphthalenivorans
NCBI taxonomy Id: 441103
Other names: DSM 19561, JCM 14838, T. naphthalenivorans, Tropicibacter naphthalenivorans Harwati et al. 2009, alpha proteobacterium C02, strain C02
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