STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH75343.1Putative thiol oxidoreductase. (511 aa)    
Predicted Functional Partners:
irpA
Iron-regulated protein A precursor.
 
  
 0.988
CUH75341.1
Putative iron-regulated protein.
    0.987
CUH75347.1
Hypothetical protein.
 
  
 0.985
CUH75340.1
Hypothetical protein.
 
     0.763
CUH75339.1
Hypothetical protein.
       0.542
CUH80573.1
Hypothetical protein.
   
    0.481
CUH81823.1
Hypothetical protein.
   
    0.481
CUH75267.1
Nickel uptake substrate-specific transmembrane region.
   
    0.438
CUH80808.1
Nickel uptake substrate-specific transmembrane region.
   
    0.438
CUH77432.1
PAS domain protein.
  
     0.428
Your Current Organism:
Tropicibacter naphthalenivorans
NCBI taxonomy Id: 441103
Other names: DSM 19561, JCM 14838, T. naphthalenivorans, Tropicibacter naphthalenivorans Harwati et al. 2009, alpha proteobacterium C02, strain C02
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.