STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH75363.1Tellurite resistance protein. (140 aa)    
Predicted Functional Partners:
lysS
Lysine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.727
CUH79070.1
Hypothetical protein.
  
     0.691
djlA
DnaJ-like protein DjlA.
  
     0.612
CUH78572.1
MarR family protein.
  
     0.577
CUH80030.1
LysM domain/BON superfamily protein.
  
     0.572
CUH79494.1
Tetratricopeptide repeat protein.
  
     0.568
CUH78622.1
Hypothetical protein.
  
     0.549
CUH75419.1
Universal stress protein family protein.
  
     0.508
quiP
Acyl-homoserine lactone acylase QuiP precursor.
  
     0.468
ykuD
Putative L,D-transpeptidase YkuD.
       0.467
Your Current Organism:
Tropicibacter naphthalenivorans
NCBI taxonomy Id: 441103
Other names: DSM 19561, JCM 14838, T. naphthalenivorans, Tropicibacter naphthalenivorans Harwati et al. 2009, alpha proteobacterium C02, strain C02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.