STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH75926.1Hypothetical protein. (62 aa)    
Predicted Functional Partners:
hupC
Putative Ni/Fe-hydrogenase B-type cytochrome subunit.
       0.773
hoxL
Uptake hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
       0.705
hoxK
Uptake hydrogenase small subunit precursor.
       0.705
CUH75920.1
Hydrogenase assembly chaperone HypC/HupF.
       0.407
hybD
Hydrogenase 2 maturation protease.
       0.407
CUH75918.1
Hydrogenase-1 expression protein HyaE; Belongs to the HupG/HyaE family.
       0.404
hypF
Carbamoyltransferase HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide.
       0.401
CUH75934.1
Periplasmic [NiFeSe] hydrogenase large subunit.
       0.401
hydA
Periplasmic [NiFe] hydrogenase small subunit precursor.
       0.401
zraS_1
Sensor protein ZraS.
       0.401
Your Current Organism:
Tropicibacter naphthalenivorans
NCBI taxonomy Id: 441103
Other names: DSM 19561, JCM 14838, T. naphthalenivorans, Tropicibacter naphthalenivorans Harwati et al. 2009, alpha proteobacterium C02, strain C02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.