STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dadAD-amino acid dehydrogenase small subunit. (412 aa)    
Predicted Functional Partners:
gcvT_4
Aminomethyltransferase; Belongs to the GcvT family.
  
 0.975
gcvT_7
Aminomethyltransferase; Belongs to the GcvT family.
  
 0.975
gcvT_8
Aminomethyltransferase; Belongs to the GcvT family.
  
 0.975
gcvT_10
Aminomethyltransferase; Belongs to the GcvT family.
  
 0.975
gltB
Glutamate synthase [NADPH] large chain precursor.
  
 
 0.777
CUH80021.1
Sarcosine oxidase, gamma subunit family.
  
  0.723
CUH82141.1
Sarcosine oxidase, gamma subunit family.
  
  0.715
CUH77854.1
Sarcosine oxidase, gamma subunit family.
  
  0.709
CUH80017.1
Sarcosine oxidase, delta subunit family.
  
 0.698
CUH80699.1
Sarcosine oxidase, delta subunit family.
  
 0.698
Your Current Organism:
Tropicibacter naphthalenivorans
NCBI taxonomy Id: 441103
Other names: DSM 19561, JCM 14838, T. naphthalenivorans, Tropicibacter naphthalenivorans Harwati et al. 2009, alpha proteobacterium C02, strain C02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.