Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUH76182.1 | CUH76187.1 | TRN7648_00822 | TRN7648_00824 | Putative HTH-type transcriptional regulatorc/MT2039; Belongs to the LysR transcriptional regulatory family. | Carboxylate/amino acid/amine transporter. | 0.463 |
CUH76182.1 | argO | TRN7648_00822 | TRN7648_00823 | Putative HTH-type transcriptional regulatorc/MT2039; Belongs to the LysR transcriptional regulatory family. | Arginine exporter protein ArgO. | 0.934 |
CUH76182.1 | rhtC | TRN7648_00822 | TRN7648_00419 | Putative HTH-type transcriptional regulatorc/MT2039; Belongs to the LysR transcriptional regulatory family. | Threonine efflux protein. | 0.435 |
CUH76187.1 | CUH76182.1 | TRN7648_00824 | TRN7648_00822 | Carboxylate/amino acid/amine transporter. | Putative HTH-type transcriptional regulatorc/MT2039; Belongs to the LysR transcriptional regulatory family. | 0.463 |
CUH76187.1 | argO | TRN7648_00824 | TRN7648_00823 | Carboxylate/amino acid/amine transporter. | Arginine exporter protein ArgO. | 0.674 |
argO | CUH76182.1 | TRN7648_00823 | TRN7648_00822 | Arginine exporter protein ArgO. | Putative HTH-type transcriptional regulatorc/MT2039; Belongs to the LysR transcriptional regulatory family. | 0.934 |
argO | CUH76187.1 | TRN7648_00823 | TRN7648_00824 | Arginine exporter protein ArgO. | Carboxylate/amino acid/amine transporter. | 0.674 |
argO | rhtC | TRN7648_00823 | TRN7648_00419 | Arginine exporter protein ArgO. | Threonine efflux protein. | 0.473 |
rhtC | CUH76182.1 | TRN7648_00419 | TRN7648_00822 | Threonine efflux protein. | Putative HTH-type transcriptional regulatorc/MT2039; Belongs to the LysR transcriptional regulatory family. | 0.435 |
rhtC | argO | TRN7648_00419 | TRN7648_00823 | Threonine efflux protein. | Arginine exporter protein ArgO. | 0.473 |