STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nifSCysteine desulfurase. (347 aa)    
Predicted Functional Partners:
iscR
HTH-type transcriptional regulator IscR.
 
 
 0.999
CUH80464.1
SUF system FeS assembly protein, NifU family.
  
 0.999
tusA
Sulfurtransferase TusA; Belongs to the sulfur carrier protein TusA family.
   
 0.995
iscA
Iron-sulfur cluster assembly protein; Belongs to the HesB/IscA family.
 
  
 0.961
acpP_1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.959
acpP_2
Acyl carrier protein.
    
 
 0.959
moeZ
Putative adenylyltransferase/sulfurtransferase MoeZ.
 
 
 0.929
CUH76170.1
Ferredoxin VI.
 
 0.925
thcC
Rhodocoxin.
 
 0.925
CUH80608.1
Ferredoxin VI.
  
 0.914
Your Current Organism:
Tropicibacter naphthalenivorans
NCBI taxonomy Id: 441103
Other names: DSM 19561, JCM 14838, T. naphthalenivorans, Tropicibacter naphthalenivorans Harwati et al. 2009, alpha proteobacterium C02, strain C02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.