Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUH77070.1 | eno | TRN7648_01277 | TRN7648_01276 | Phosphonate utilization associated putative membrane protein. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.498 |
CUH77070.1 | glk | TRN7648_01277 | TRN7648_01279 | Phosphonate utilization associated putative membrane protein. | Glucokinase; Belongs to the bacterial glucokinase family. | 0.441 |
CUH77070.1 | pgm | TRN7648_01277 | TRN7648_01278 | Phosphonate utilization associated putative membrane protein. | Phosphoglucomutase. | 0.714 |
eno | CUH77070.1 | TRN7648_01276 | TRN7648_01277 | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Phosphonate utilization associated putative membrane protein. | 0.498 |
eno | pgm | TRN7648_01276 | TRN7648_01278 | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Phosphoglucomutase. | 0.740 |
glk | CUH77070.1 | TRN7648_01279 | TRN7648_01277 | Glucokinase; Belongs to the bacterial glucokinase family. | Phosphonate utilization associated putative membrane protein. | 0.441 |
glk | pgm | TRN7648_01279 | TRN7648_01278 | Glucokinase; Belongs to the bacterial glucokinase family. | Phosphoglucomutase. | 0.939 |
pgm | CUH77070.1 | TRN7648_01278 | TRN7648_01277 | Phosphoglucomutase. | Phosphonate utilization associated putative membrane protein. | 0.714 |
pgm | eno | TRN7648_01278 | TRN7648_01276 | Phosphoglucomutase. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.740 |
pgm | glk | TRN7648_01278 | TRN7648_01279 | Phosphoglucomutase. | Glucokinase; Belongs to the bacterial glucokinase family. | 0.939 |