STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pacSCation-transporting ATPase PacS. (728 aa)    
Predicted Functional Partners:
CUH77915.1
Cytochrome c oxidase accessory protein CcoG.
 
  
 0.970
CUH77917.1
Putative integral membrane protein linked to a cation pump.
 
   
 0.965
CUH77919.1
Cytochrome oxidase maturation protein, cbb3-type.
 
  
 0.954
actP_3
Copper-transporting P-type ATPase.
   
 0.919
fixN
Hypothetical protein; Cytochrome c oxidase subunit 1 homolog, bacteroid; Belongs to the heme-copper respiratory oxidase family.
 
   
 0.775
CUH77901.1
Cbb3-type cytochrome c oxidase subunit II.
 
   
 0.762
actP_4
Copper-transporting P-type ATPase.
 
 
0.730
actP_1
Copper-transporting P-type ATPase.
 
 
0.729
copZ
Copper chaperone CopZ.
  
 
 0.704
ccoP_1
Cytochrome c oxidase subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
     0.676
Your Current Organism:
Tropicibacter naphthalenivorans
NCBI taxonomy Id: 441103
Other names: DSM 19561, JCM 14838, T. naphthalenivorans, Tropicibacter naphthalenivorans Harwati et al. 2009, alpha proteobacterium C02, strain C02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.