STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH79012.1Hypothetical protein. (239 aa)    
Predicted Functional Partners:
CUH76520.1
Hypothetical protein.
  
     0.740
CUH77139.1
Hypothetical protein.
  
     0.710
CUH76646.1
Hypothetical protein.
  
     0.707
CUH78906.1
Hypothetical protein.
  
     0.704
CUH80338.1
Hypothetical protein.
  
     0.693
CUH75370.1
Hypothetical protein.
  
     0.692
CUH79009.1
Hypothetical protein.
 
     0.676
CUH80336.1
Hypothetical protein.
  
     0.665
CUH79010.1
Hypothetical protein.
       0.659
CUH78025.1
Family finger-like domain protein.
  
     0.625
Your Current Organism:
Tropicibacter naphthalenivorans
NCBI taxonomy Id: 441103
Other names: DSM 19561, JCM 14838, T. naphthalenivorans, Tropicibacter naphthalenivorans Harwati et al. 2009, alpha proteobacterium C02, strain C02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.