STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pglCUndecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase. (229 aa)    
Predicted Functional Partners:
wzc_2
Tyrosine-protein kinase wzc.
 
 
 0.956
algA_2
Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.924
wzc_1
Tyrosine-protein kinase wzc.
 
 
 0.795
epsM
Putative acetyltransferase EpsM.
 
  
 0.712
pglF
UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase.
 
 0.636
epsH
Putative glycosyltransferase EpsH.
 
  
 0.614
wbbL
N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase.
 
 0.601
tuaB
Teichuronic acid biosynthesis protein TuaB.
 
  
 0.597
icaA
Poly-beta-1,6-N-acetyl-D-glucosamine synthase.
   
 0.559
CUH77839.1
Polysaccharide export protein Wza.
  
 
 0.545
Your Current Organism:
Tropicibacter naphthalenivorans
NCBI taxonomy Id: 441103
Other names: DSM 19561, JCM 14838, T. naphthalenivorans, Tropicibacter naphthalenivorans Harwati et al. 2009, alpha proteobacterium C02, strain C02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.