Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUH79723.1 | CUH79736.1 | TRN7648_02615 | TRN7648_02622 | Flagellar basal body rod protein FlgB. | Flagellar hook-length control protein FliK. | 0.976 |
CUH79723.1 | flgC | TRN7648_02615 | TRN7648_02614 | Flagellar basal body rod protein FlgB. | Putative proximal rod protein; Belongs to the flagella basal body rod proteins family. | 0.999 |
CUH79723.1 | flgD | TRN7648_02615 | TRN7648_02623 | Flagellar basal body rod protein FlgB. | Basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | 0.998 |
CUH79723.1 | flgE | TRN7648_02615 | TRN7648_02597 | Flagellar basal body rod protein FlgB. | Flagellar hook protein FlgE. | 0.997 |
CUH79723.1 | flgG_1 | TRN7648_02615 | TRN7648_02610 | Flagellar basal body rod protein FlgB. | Distal rod protein; Belongs to the flagella basal body rod proteins family. | 0.998 |
CUH79723.1 | flgH | TRN7648_02615 | TRN7648_02608 | Flagellar basal body rod protein FlgB. | Basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.999 |
CUH79723.1 | flgI | TRN7648_02615 | TRN7648_02600 | Flagellar basal body rod protein FlgB. | Basal body P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.995 |
CUH79723.1 | fliE | TRN7648_02615 | TRN7648_02613 | Flagellar basal body rod protein FlgB. | Flagellar hook-basal body protein FliE. | 0.999 |
CUH79723.1 | fliF | TRN7648_02615 | TRN7648_02346 | Flagellar basal body rod protein FlgB. | Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.999 |
CUH79723.1 | fliQ | TRN7648_02615 | TRN7648_02612 | Flagellar basal body rod protein FlgB. | Flagellar biosynthetic protein FliQ. | 0.999 |
CUH79736.1 | CUH79723.1 | TRN7648_02622 | TRN7648_02615 | Flagellar hook-length control protein FliK. | Flagellar basal body rod protein FlgB. | 0.976 |
CUH79736.1 | flgC | TRN7648_02622 | TRN7648_02614 | Flagellar hook-length control protein FliK. | Putative proximal rod protein; Belongs to the flagella basal body rod proteins family. | 0.958 |
CUH79736.1 | flgD | TRN7648_02622 | TRN7648_02623 | Flagellar hook-length control protein FliK. | Basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | 0.998 |
CUH79736.1 | flgE | TRN7648_02622 | TRN7648_02597 | Flagellar hook-length control protein FliK. | Flagellar hook protein FlgE. | 0.976 |
CUH79736.1 | flgG_1 | TRN7648_02622 | TRN7648_02610 | Flagellar hook-length control protein FliK. | Distal rod protein; Belongs to the flagella basal body rod proteins family. | 0.848 |
CUH79736.1 | flgH | TRN7648_02622 | TRN7648_02608 | Flagellar hook-length control protein FliK. | Basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.966 |
CUH79736.1 | flgI | TRN7648_02622 | TRN7648_02600 | Flagellar hook-length control protein FliK. | Basal body P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.950 |
CUH79736.1 | fliE | TRN7648_02622 | TRN7648_02613 | Flagellar hook-length control protein FliK. | Flagellar hook-basal body protein FliE. | 0.972 |
CUH79736.1 | fliF | TRN7648_02622 | TRN7648_02346 | Flagellar hook-length control protein FliK. | Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.966 |
CUH79736.1 | fliQ | TRN7648_02622 | TRN7648_02612 | Flagellar hook-length control protein FliK. | Flagellar biosynthetic protein FliQ. | 0.935 |
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