STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH79816.1Hypothetical protein. (299 aa)    
Predicted Functional Partners:
CUH79814.1
Hypothetical protein.
       0.862
CUH76166.1
His-Xaa-Ser repeat protein HxsA.
  
     0.772
CUH80303.1
Hypothetical protein.
  
     0.766
CUH77042.1
Hom_end-associated Hint.
  
     0.764
CUH79251.1
Hypothetical protein.
  
     0.743
CUH80896.1
Hypothetical protein.
  
     0.735
CUH82597.1
Hypothetical protein.
  
     0.725
CUH75224.1
Sporulation related domain protein.
  
     0.724
CUH79450.1
Hypothetical protein.
  
     0.724
CUH79278.1
Core-2/I-Branching enzyme.
  
     0.719
Your Current Organism:
Tropicibacter naphthalenivorans
NCBI taxonomy Id: 441103
Other names: DSM 19561, JCM 14838, T. naphthalenivorans, Tropicibacter naphthalenivorans Harwati et al. 2009, alpha proteobacterium C02, strain C02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.