STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH80176.1Phage portal protein, HK97 family. (397 aa)    
Predicted Functional Partners:
CUH80181.1
Phage major capsid protein, HK97 family.
 
 
 
 0.997
CUH80184.1
Phage gp6-like head-tail connector protein.
 
   0.996
CUH80186.1
Bacteriophage head-tail adaptor.
 
 
 0.995
CUH80187.1
Hypothetical protein.
 
 
   0.995
CUH80189.1
Phage major tail protein, TP901-1 family.
 
   0.995
CUH80197.1
Hypothetical protein.
 
 
   0.993
CUH80199.1
Hypothetical protein.
 
   0.993
CUH80203.1
Hypothetical protein.
 
   0.993
CUH81540.1
Hypothetical protein.
 
 
   0.990
CUH81526.1
Hypothetical protein.
 
   0.989
Your Current Organism:
Tropicibacter naphthalenivorans
NCBI taxonomy Id: 441103
Other names: DSM 19561, JCM 14838, T. naphthalenivorans, Tropicibacter naphthalenivorans Harwati et al. 2009, alpha proteobacterium C02, strain C02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.