Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUH79340.1 | CUH80661.1 | TRN7648_02421 | TRN7648_03080 | Putative FAD-linked oxidoreductase. | Putative FAD-linked oxidoreductase. | 0.733 |
CUH79340.1 | bfmBAB | TRN7648_02421 | TRN7648_02873 | Putative FAD-linked oxidoreductase. | 2-oxoisovalerate dehydrogenase subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.714 |
CUH79340.1 | glcB | TRN7648_02421 | TRN7648_02753 | Putative FAD-linked oxidoreductase. | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.872 |
CUH79340.1 | gltB | TRN7648_02421 | TRN7648_02002 | Putative FAD-linked oxidoreductase. | Glutamate synthase [NADPH] large chain precursor. | 0.743 |
CUH79340.1 | lutA | TRN7648_02421 | TRN7648_02423 | Putative FAD-linked oxidoreductase. | Lactate utilization protein A. | 0.993 |
CUH79340.1 | maeB | TRN7648_02421 | TRN7648_00322 | Putative FAD-linked oxidoreductase. | NADP-dependent malic enzyme. | 0.722 |
CUH79340.1 | nqo1_1 | TRN7648_02421 | TRN7648_00935 | Putative FAD-linked oxidoreductase. | NADH-quinone oxidoreductase subunit 1. | 0.820 |
CUH79340.1 | plsB | TRN7648_02421 | TRN7648_01716 | Putative FAD-linked oxidoreductase. | Glycerol-3-phosphate acyltransferase. | 0.679 |
CUH79340.1 | tme | TRN7648_02421 | TRN7648_02568 | Putative FAD-linked oxidoreductase. | NADP-dependent malic enzyme. | 0.722 |
CUH80661.1 | CUH79340.1 | TRN7648_03080 | TRN7648_02421 | Putative FAD-linked oxidoreductase. | Putative FAD-linked oxidoreductase. | 0.733 |
CUH80661.1 | acoA | TRN7648_03080 | TRN7648_02874 | Putative FAD-linked oxidoreductase. | Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.656 |
CUH80661.1 | bfmBAB | TRN7648_03080 | TRN7648_02873 | Putative FAD-linked oxidoreductase. | 2-oxoisovalerate dehydrogenase subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.714 |
CUH80661.1 | glcB | TRN7648_03080 | TRN7648_02753 | Putative FAD-linked oxidoreductase. | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.646 |
CUH80661.1 | gltB | TRN7648_03080 | TRN7648_02002 | Putative FAD-linked oxidoreductase. | Glutamate synthase [NADPH] large chain precursor. | 0.743 |
CUH80661.1 | lutA | TRN7648_03080 | TRN7648_02423 | Putative FAD-linked oxidoreductase. | Lactate utilization protein A. | 0.741 |
CUH80661.1 | maeB | TRN7648_03080 | TRN7648_00322 | Putative FAD-linked oxidoreductase. | NADP-dependent malic enzyme. | 0.722 |
CUH80661.1 | nqo1_1 | TRN7648_03080 | TRN7648_00935 | Putative FAD-linked oxidoreductase. | NADH-quinone oxidoreductase subunit 1. | 0.820 |
CUH80661.1 | plsB | TRN7648_03080 | TRN7648_01716 | Putative FAD-linked oxidoreductase. | Glycerol-3-phosphate acyltransferase. | 0.679 |
CUH80661.1 | tme | TRN7648_03080 | TRN7648_02568 | Putative FAD-linked oxidoreductase. | NADP-dependent malic enzyme. | 0.722 |
acoA | CUH80661.1 | TRN7648_02874 | TRN7648_03080 | Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Putative FAD-linked oxidoreductase. | 0.656 |
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