STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadH_2Putative 2,4-dienoyl-CoA reductase. (267 aa)    
Predicted Functional Partners:
ppsE
Beta-ketoacyl-acyl-carrier-protein synthase I.
  
 0.897
paaG_3
1,2-epoxyphenylacetyl-CoA isomerase.
  
  0.804
garR_3
2-hydroxy-3-oxopropionate reductase.
       0.773
gltB
Glutamate synthase [NADPH] large chain precursor.
     
 0.749
xecD
2-(R)-hydroxypropyl-CoM dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.723
CUH81284.1
Enterobactin exporter EntS.
  
    0.697
CUH81286.1
2-acyl-glycerophospho-ethanolamine acyltransferase.
  
    0.697
dhbF
Dimodular nonribosomal peptide synthase.
  
 0.682
fabD
Malonyl CoA-acyl carrier protein transacylase.
 
 0.648
fabG_3
3-oxoacyl-[acyl-carrier-protein] reductase FabG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.630
Your Current Organism:
Tropicibacter naphthalenivorans
NCBI taxonomy Id: 441103
Other names: DSM 19561, JCM 14838, T. naphthalenivorans, Tropicibacter naphthalenivorans Harwati et al. 2009, alpha proteobacterium C02, strain C02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.