STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH81344.1Putative aminoglycoside phosphotransferase. (335 aa)    
Predicted Functional Partners:
bbsG
(R)-benzylsuccinyl-CoA dehydrogenase.
  0.994
CUH81353.1
Acyl-CoA dehydrogenase fadE12.
 
  0.955
mmgC_8
Acyl-CoA dehydrogenase.
 
  0.897
fabG1
3-oxoacyl-[acyl-carrier-protein] reductase FabG1.
 
   0.853
fabG_10
3-oxoacyl-[acyl-carrier-protein] reductase FabG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
   0.760
acdA_1
Acyl-CoA dehydrogenase.
 
  0.726
mmgC_4
Acyl-CoA dehydrogenase.
 
  0.665
qorA
Quinone oxidoreductase 1.
 
  0.657
acdA_5
Acyl-CoA dehydrogenase.
  0.638
fadB
Fatty acid oxidation complex subunit alpha; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.604
Your Current Organism:
Tropicibacter naphthalenivorans
NCBI taxonomy Id: 441103
Other names: DSM 19561, JCM 14838, T. naphthalenivorans, Tropicibacter naphthalenivorans Harwati et al. 2009, alpha proteobacterium C02, strain C02
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