STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yvgNGlyoxal reductase. (286 aa)    
Predicted Functional Partners:
yhdN_1
General stress protein 69.
 
 0.867
ppsE
Beta-ketoacyl-acyl-carrier-protein synthase I.
   
 
 0.838
yvaA_1
Putative oxidoreductase YvaA.
 
 
 0.832
metH_2
Methionine synthase.
   
 0.802
yhdN_2
General stress protein 69.
 
0.797
CUH78585.1
Alcohol dehydrogenase.
 
 
 0.791
ligC_2
4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase.
  
 
 0.758
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
 
 0.754
cysJ
Sulfite reductase [NADPH] flavoprotein alpha-component.
  
 
 0.698
CUH81825.1
Cytochrome P450(BM-3).
  
 
 0.698
Your Current Organism:
Tropicibacter naphthalenivorans
NCBI taxonomy Id: 441103
Other names: DSM 19561, JCM 14838, T. naphthalenivorans, Tropicibacter naphthalenivorans Harwati et al. 2009, alpha proteobacterium C02, strain C02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.