STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH82206.1Hypothetical protein. (48 aa)    
Predicted Functional Partners:
CUH82208.1
Metallo-beta-lactamase L1 precursor.
       0.645
cysJ
Sulfite reductase [NADPH] flavoprotein alpha-component.
    
  0.533
CUH81825.1
Cytochrome P450(BM-3).
    
  0.533
blh_1
Beta-lactamase hydrolase-like protein.
    
  0.497
gcvT_4
Aminomethyltransferase; Belongs to the GcvT family.
  
 
  0.483
gcvT_7
Aminomethyltransferase; Belongs to the GcvT family.
  
 
  0.483
gcvT_8
Aminomethyltransferase; Belongs to the GcvT family.
  
 
  0.483
gcvT_10
Aminomethyltransferase; Belongs to the GcvT family.
  
 
  0.483
fccB
Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain precursor.
    
  0.449
ybeY
Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
   
 
 0.429
Your Current Organism:
Tropicibacter naphthalenivorans
NCBI taxonomy Id: 441103
Other names: DSM 19561, JCM 14838, T. naphthalenivorans, Tropicibacter naphthalenivorans Harwati et al. 2009, alpha proteobacterium C02, strain C02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.