STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH82681.1Bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase. (598 aa)    
Predicted Functional Partners:
sat/cysC
Putative bifunctional SAT/APS kinase; Catalyzes the synthesis of activated sulfate.
    
 0.706
CUH82680.1
Sel1 repeat.
       0.693
gcvP
Glycine dehydrogenase [decarboxylating]; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
 
  0.690
CUH82684.1
Vi polysaccharide biosynthesis protein TviE.
 
     0.675
CUH82682.1
Hypothetical protein.
       0.671
CUH82683.1
Hypothetical protein.
       0.671
CUH82685.1
Hypothetical protein.
 
     0.606
CUH82679.1
Vi polysaccharide biosynthesis protein TviD.
       0.587
gcvT_1
Aminomethyltransferase; Belongs to the GcvT family.
   
  0.513
gcvT_2
Aminomethyltransferase; Belongs to the GcvT family.
   
  0.513
Your Current Organism:
Tropicibacter naphthalenivorans
NCBI taxonomy Id: 441103
Other names: DSM 19561, JCM 14838, T. naphthalenivorans, Tropicibacter naphthalenivorans Harwati et al. 2009, alpha proteobacterium C02, strain C02
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.