STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB77276.1Sugar or nucleoside kinase, ribokinase family. (312 aa)    
Predicted Functional Partners:
SFC80308.1
Tagatose-bisphosphate aldolase noncatalytic subunit.
 
  
  0.891
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
   
 0.774
SFB79653.1
Mannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.735
SFC87875.1
PTS system, fructose-specific IIC component.
     
 0.733
SFB77415.1
Tagatose-bisphosphate aldolase noncatalytic subunit.
 
  
  0.730
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
 
 0.694
rpiA
Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
    
 0.691
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
 
 0.685
SFD03797.1
Ribose 5-phosphate isomerase B.
  
 
 0.683
SFC73537.1
Sugar or nucleoside kinase, ribokinase family.
  
  
  0.678
Your Current Organism:
Tropicimonas isoalkanivorans
NCBI taxonomy Id: 441112
Other names: DSM 19548, JCM 14837, T. isoalkanivorans, Tropicimonas isoalkanivorans Harwati et al. 2009, alpha proteobacterium B51, strain B51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.