STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB82173.1Hypothetical protein. (112 aa)    
Predicted Functional Partners:
SFB82239.1
Phage terminase, small subunit, putative, P27 family.
       0.791
SFB82220.1
Phage terminase-like protein, large subunit, contains N-terminal HTH domain.
       0.790
SFB82261.1
Phage head-tail adaptor, putative, SPP1 family.
       0.790
SFB82281.1
Protein of unknown function.
       0.790
SFB82319.1
Phage gp6-like head-tail connector protein.
       0.790
SFB82300.1
Phage protein, HK97 gp10 family.
       0.788
SFB82361.1
Hypothetical protein.
       0.778
SFB82194.1
Hypothetical protein.
       0.773
SFB82341.1
Hypothetical protein.
       0.773
SFB82463.1
Hypothetical protein.
       0.400
Your Current Organism:
Tropicimonas isoalkanivorans
NCBI taxonomy Id: 441112
Other names: DSM 19548, JCM 14837, T. isoalkanivorans, Tropicimonas isoalkanivorans Harwati et al. 2009, alpha proteobacterium B51, strain B51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.