STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB82463.1Hypothetical protein. (128 aa)    
Predicted Functional Partners:
SFB82478.1
Phage portal protein, HK97 family.
       0.774
SFB82380.1
Hypothetical protein.
       0.773
SFB82401.1
Phage major capsid protein, HK97 family.
       0.773
SFB82423.1
Phage prohead protease, HK97 family.
       0.773
SFB82446.1
Hypothetical protein.
       0.773
SFB82361.1
Hypothetical protein.
       0.438
SFB82319.1
Phage gp6-like head-tail connector protein.
       0.430
SFB82239.1
Phage terminase, small subunit, putative, P27 family.
       0.421
SFB82261.1
Phage head-tail adaptor, putative, SPP1 family.
       0.421
SFB82281.1
Protein of unknown function.
       0.421
Your Current Organism:
Tropicimonas isoalkanivorans
NCBI taxonomy Id: 441112
Other names: DSM 19548, JCM 14837, T. isoalkanivorans, Tropicimonas isoalkanivorans Harwati et al. 2009, alpha proteobacterium B51, strain B51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.