STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB83275.1Serine O-acetyltransferase. (275 aa)    
Predicted Functional Partners:
SFC58534.1
Cysteine synthase A.
 
 0.969
SFB74777.1
Cysteine synthase A.
 
 0.966
SFC08941.1
Cysteine synthase A.
 
 0.941
cysS
cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 
 0.938
SFD02674.1
Phosphoserine phosphatase.
 
  
 0.895
SFC73657.1
Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
 
 0.814
SFC09661.1
Polymer biosynthesis protein, WecB/TagA/CpsF family.
  
 
 0.813
SFC62393.1
Cystathionine beta-lyase.
 
 
 0.800
SFB85649.1
Capsular exopolysaccharide family.
  
 
 0.789
SFB86378.1
Capsular exopolysaccharide family.
  
 
 0.789
Your Current Organism:
Tropicimonas isoalkanivorans
NCBI taxonomy Id: 441112
Other names: DSM 19548, JCM 14837, T. isoalkanivorans, Tropicimonas isoalkanivorans Harwati et al. 2009, alpha proteobacterium B51, strain B51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.