STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB83476.1Phage conserved hypothetical protein. (80 aa)    
Predicted Functional Partners:
SFB83498.1
Phage tail tube protein, GTA-gp10.
 
     0.948
SFB83450.1
Phage tail tape measure protein, lambda family.
 
     0.942
SFB83548.1
Protein of unknown function.
 
     0.919
SFB83523.1
Phage major tail protein, TP901-1 family.
 
     0.918
SFB83573.1
Head-tail adaptor.
 
     0.918
SFB83610.1
Phage conserved hypothetical protein, phiE125 gp8 family.
 
     0.918
SFB83421.1
TIGR02217 family protein.
 
     0.815
SFB83393.1
Phage conserved hypothetical protein BR0599.
 
     0.811
SFB83349.1
Putative phage cell wall peptidase, NlpC/P60 family.
 
     0.798
SFB83315.1
Putative phage tail protein.
 
     0.774
Your Current Organism:
Tropicimonas isoalkanivorans
NCBI taxonomy Id: 441112
Other names: DSM 19548, JCM 14837, T. isoalkanivorans, Tropicimonas isoalkanivorans Harwati et al. 2009, alpha proteobacterium B51, strain B51
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