STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB99837.1Type I restriction enzyme, R subunit. (792 aa)    
Predicted Functional Partners:
SFB99869.1
Type I restriction enzyme M protein.
 
 
 0.978
SFB99899.1
Type I restriction enzyme, S subunit.
 
 
 0.973
SFD29637.1
Type I restriction-modification system, DNA methylase subunit.
 
 
 0.906
SFC44315.1
Type I restriction enzyme, S subunit.
 
 
 0.755
SFC90077.1
Type I restriction enzyme M protein.
 
 
 0.739
SFD29462.1
Type I restriction enzyme M protein.
 
 
 0.734
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.726
SFB99928.1
Hypothetical protein.
       0.723
SFC90057.1
Type I restriction enzyme, S subunit.
 
 
 0.710
SFD20470.1
Methyltransferase domain-containing protein.
  
 
 0.669
Your Current Organism:
Tropicimonas isoalkanivorans
NCBI taxonomy Id: 441112
Other names: DSM 19548, JCM 14837, T. isoalkanivorans, Tropicimonas isoalkanivorans Harwati et al. 2009, alpha proteobacterium B51, strain B51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.